It is a powerful technique used to determine the transcriptome of a cell or tissue by sequencing all the messenger RNA (mRNA) molecules. Since mRNA carries the coding information for proteins, mRNA sequencing reveals the expression levels of genes, indicating which genes are actively transcribed and how much mRNA is produced. This helps researchers understand gene activity, identify differentially expressed genes across different conditions or cell types, and study processes like gene regulation, alternative splicing, and the impact of various treatments or diseases.
Human, Mouse, Plants, Fungi and other organisms
NGS
Sample Type | Concentration | Recommended Amount | Minimum Amount | Minimum volume (µl) | Storage (°C) | Buffer | Recommended RIN/DIN | Shipment | Storage tube |
---|---|---|---|---|---|---|---|---|---|
Tissue (Frozen) | NA | 100 mg | 15-30 mg | NA | -80 | RNA later/fresh/flash frozen | >7 | Dry ice | Preferably Cryovials |
Cell Pellet (Eukaryotic) | NA | 2-3 million cells | 1 million | NA | -80 | RNA later/fresh/flash frozen | NA | Dry ice | Preferably Cryovials |
Cell Pellet (Microorganisms) | NA | 100 million cells | 10 million (Depends on the organism and its size) | NA | -80 | RNA later/fresh/flash frozen | NA | Dry ice | Preferably Cryovials |
Blood | NA | 2.5 ml | NA | 2500 | -80 | NA | >7 | Dry ice | PAXgene Tubes |
FFPE | NA | Block with enough material | NA | NA | 4 | NA | NA | RT or ice pack | NA |
RNA | ≥ 50 ng/µl | ≥ 1000 ng | 500 ng | 10-20 | -80 | NFW | >7 | Dry ice | 1.5 ml or 0.5 ml tubes |
cDNA | ≥ 10 ng/µl | ≥ 200 ng | 50 ng | 10-20 | 4/-20/-80 | EB, or low TE (<0.1 mM EDTA) | >5 | Ice pack | 1.5 ml or 0.5 ml tubes |