Amplicon sequencing is a highly targeted approach that allows researchers to analyze genetic variation in specific regions of the genome. Amplicon sequencing helps detect rare somatic mutations in complex samples, such as those with mixed tumor and germline DNA. It also has lower sequencing costs and turnaround times compared to more comprehensive approaches such as whole-genome sequencing.
Human, Mouse, Plants, Bacteria, Fungi and other organisms
NGS
Sample Type | Concentration | Recommended Amount | Minimum Amount | Minimum volume (µl) | Storage (°C) | Buffer | Recommended RIN/DIN | Shipment | Storage tube |
---|---|---|---|---|---|---|---|---|---|
Soil/sediments | NA | 500 mg | 100 mg | NA | 4 | NA | NA | Ice pack | |
Liquid samples | NA | 25-50 ml | NA | 10 ml | 4 | NA | NA | Ice pack | |
Feces (Human) | NA | Follow Kit instructions | Follow Kit instructions | NA | 4/RT | NA | NA | Ice pack | Shared in colection kit tubes |
Feces (Other species) | NA | 100 mg | 15-30 mg | NA | 4/-20 | NA | NA | Ice pack | Shared in colection kit tubes/1.5 ml tubes/ Cryovials |
DNA | ≥ 10 ng/µl | ≥ 500 ng | 150 ng | 10-20 | 4/-20/-80 | EB, or low TE (<0.1 mM EDTA) | >5 | Ice pack | 1.5 ml or 0.5 ml tubes |
PCR purified products | ≥ 20 ng/µl | ≥ 1.5 µg | 10-20 | 4/-20/-80 | EB, or low TE (<0.1 mM EDTA) | NA | Ice pack | 1.5 ml or 0.5 ml tubes |